Production of an Antibody Toolkit for Characterizing Human Embryonic Stem Cells and Their Differentiated Progeny
Monoclonal antibodies are essential tools in many fields of biomedical research. The power of the technology is that each antibody has exquisite specificity able to identify and study single proteins expressed by cells and tissues. This nobel prize-winning technology has revolutionized biologistsí ability to analyze and separate individual cell populations. Moreover, monoclonal antibodies have been developed into potent therapeutics that have changed medical care.
Since the early 1980s, when methods for culturing mouse embryonic stem cells (ESCs) were first developed, there has been a need for reagents, including antibodies, that could define different stages of development and differentiation. These studies have met with limited success, in part to do the highly heterogeneous nature of developing tissues. With the discovery of human ESCs in 1998, the challenges have increased. It has become clear that while they share many characteristics of their mouse counterpars, human ESCs also have unique attributes. For example, work from our group shows that master regulators of developmental decisions have different patterns of expression in mouse and human embryos. These data suggest the corollary that the downstream effectors whose actions they control are also expressed in different patterns. In addition to the unique developmental pathways, antibodies made against mouse ESCs rarely cross-react on their human counterparts. These findings led us to the conclusion that th reagent kit that we need for studying human embryos and their derivatives needs to contain species-specific tools.
In this context, our goal is to produce a subset of these tools. Specifically, we propose making antibodies which more faithfully describe hESCs and their differentiated products than the mouse reagents that are currently used for this purpose. How will we accomplish this goal? We will take two approaches. First, a company with offices in California[REDACTED], has made their entire catalog of commercially available antibodiesómore than 300 entriesóavailable to us at no cost. These reagents are importanttools in other fields and we suspect that they will have novel applications in hESC research. The advantage of this approach is the speed with which these existing credentialed reagents can be made available to the research community. Second, we propose making brand-new antibodies. These experiments are made possible by the fact that the investigators working on this project have a great deal of experience in hESC research and in the state-of-the-art technologies that are used to produce antibodies. We wil also bank these reagents for distribution to investigators in the state of California, the US, and abroad. We think that the antibody toolkit we propose assembling will have many important applications because human-specific reagents will have higher discriminating power in many different experimental approaches routinely used in hESC research.
Human embryonic stem cell (hESC) research, only a decade old, is a very young field. In general, it takes many years for a new discipline to mature to the point where scientists have the tools they need to work at full capacity. This is especially true for hESC researchers because the federal government does not fund work that employs human embryos and/or their derivatives. Therefore, prior to enacting proposition 71, scientists in this country lacked the resources required to generate the critical tools that are needed to develop hESC-based regenerative medicine therapies. The proposed project is designed to help fill this gap by rapidly identifying or producing antibodies that investigators can use to characterize hESCs that are either pluripotent or have differentiated into specific cell types: pancreatic beta cells, cardiomyocytes, or neurons.
How will scientists exploit these valuable tools? We envision a myriad of uses. For example, we now know that we need human-specific reagents for identifying hESCs that are truly pluripotent. Being able to rapidly and confidently phenotype cells that are capable of self renewal would streamline the process of characterizing new hESC lines, which because of the many different types of assays that are required, takes months. In addition, this class of antibodies could be used for the routine assessment of hESC colonies to ensure they retain pluripotency. The methods that are currently used for this purpose are prohibitively expensive to carry out on a regular basis. Consequently, in most laboratories, they are performed at a less than optimal frequency. We think antibodies that react with antigens whose expression is modulated during differentiation will be equally valuable tools. For example, the ability to monitor with great fidelity generation of the three germ layers (ectoderm, mesoderm, and endoderm) would, in turn, enhance the development of methods for triggering these processes. Following the subsequent steps in which the progenitors differentiate into specific cell types is equally important. Numerous other applications exist including examples that have important clinical relevance such as the isolation of pure populations of hESC derivatives for transplantation purposes. Finally, it is likely that a subset of the antibodies that are identified or produced will react with yet-to-be-identified molecules or known antigens not appreciated to be expressed by hESCs that play important functional roles in the maintenance of pluripotency or specific differentiation processes.
How will Californians benefit from research that this toolkit enables? It is difficult to overstate the importance of rapidly generating the tools that are needed for researchers to translate basic discoveries made in hESC systems into regenerative medicine therapies. The proposed project is designed to accomplish this goal as quickly as possible by assembling the antibody portion of the toolkit that every hESC researcher needs.